Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYSAVIVKPKRNVFAVLDIGTTKIICLIVKVSGNFNYKITGTGYKIAEGINGGLITDIKYASYSISSTIGLAEQVSEETIDQIYVNIAGCGILSFNVHNEIIAANHEISDRDIKRVIFQTFEKYIEENVIIHNIPLRYHLDDMTDIREVSGLYGKRLSADVNVVTASRPALTNIENCITNNSGISMAGCIASAYSAGFACLSED-EKELGTAIVDIGGGCTAIGIFKRSKLIY-----ANSIPIGGVHITRDIAYGLCTSI-------------------EHAERIKILYGSTVVTSIDENEYITVQSN--ENDEQARIPKSELVDIIRPRIEEILELVKEQFRK---QKDPINKVVITGGTSRLASMKEIASYIFNK-QVRIGCPESYGGLDGEYNKNPVFSAAIGSIKLIVDTFYKNNPDMLGQDGKISKLYHWVKSKVTV |
| 3QFU Chain:A ((167-392)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQRQATKDAGT-IAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMS------TRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKAS-------------KGINPDEAVAYGAAVQAGVLS--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82476 for 1427 contacts (-57.8/contact) +
2D Compatibility (PS) -20754 + (NN) -3718 + (LL) 13620
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: -99378.0 ( -69.64 by residue)
QMean score : 0.381
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