Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKLSIVVAPDERLTTRASEVTGINDKIKELVNDMFETMYNAEGLGLAAVQIGVLKRIFVMDIQLEDIKGEPVGYESTGKFCMINPEITELSDEQVILKEGCLSIPEQSHEIRRPKYLTVKYKDLNNKEQTLKASGWLARCIQHELDHLNGILYI-RHLSKLKYDMAMKKAEKFKRHYER
4DR8 Chain:C ((17-177))-PPLDLHYLGDRVLRQPAKRVSRIDDELRQTIRQMLQTMYSADGIGLAAPQVGINKQLIVIDLELEDEQAPP--------LVLINPKIERTAGDLEQCQEGCLSIPGVYLDVERPEIVEVSYKDENGRPQRLVADGLLARCIQHEMDHLNGVLFVDRVENRLELNEALDKKGFAVQAVRP


General information:
TITO was launched using:
RESULT:

Template: 4DR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98293 for 1198 contacts (-82.0/contact) +
2D Compatibility (PS) -16758 + (NN) 560 + (LL) 340
1D Compatibility (HY) -15600 + (ID) 3350
Total energy: -133101.0 ( -111.10 by residue)
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_4DR8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DR8-query.scw
PDB file : Tito_Scwrl_4DR8.pdb: