Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHSNKAADRNSHESRKSYMVNLFGDQWKKANQIYQQYLDNALLQNITLNQGVEKMLQTLKSHNIYLAIVSNKKNINLREEVTYFKLDSYFKRVVGSCDTAEDKPSAIPLLFALEESRLPIDRENVFFVGDSI-TDILCAQNANCLPIIYGQPISG---YEDLLCFQHFDKLTDFIMKYLKDR
3QNM Chain:A ((104-233))
--------------------------------------------TKSGLMPHAKEVLEYLAP-QYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSEL-R-ESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLLE------
General information:
TITO was launched using:
RESULT:
Template:
3QNM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74828 for 913 contacts (-82.0/contact) +
2D Compatibility (PS) -13906 + (NN) -8004 + (LL) 3192
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -100096.0 ( -109.63 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_3QNM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QNM-query.scw
PDB file :
Tito_Scwrl_3QNM.pdb
: