Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSVSIMDLIPIQRGPKNWLKDKGEEILNLVRNYKKISDQKLRKIFYLLIKSAQLSKK--SSRKVEIIEIAKNLFKAGISINIISQITGLSTDRIA
1US6 Chain:A ((12-101))
---VELRPLIGLTRGLP--PTDLETITIDAIRTHRRLVEKA-DELFQALPETYKTGQACGGPQHIRYIEASIEMHAQMSALNTLYSILGFIPKVVV
General information:
TITO was launched using:
RESULT:
Template:
1US6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2240 for 521 contacts (-4.3/contact) +
2D Compatibility (PS) -9083 + (NN) -1160 + (LL) 608
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -15375.0 ( -29.51 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_1US6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1US6-query.scw
PDB file :
Tito_Scwrl_1US6.pdb
: