Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFEWNTNNIIDATGGRGKSGCHNLNISTDTRNIKKGDLFIALKGKNFDGHDFLHEAFLKGAAAAVVSEDKYRNLPVIV-V-QDTLKALH---DMASYYIRNVLVNAEVIAITGSVGKTTTKDMLHTVLSQ-YGVSHVNDGNLNNNIGLPLTILKAPENCRYLILEMGMNKAGEIKELSKISNPNIAVITNIEPVHVENFS-SLFDIAQAKLEILYG-VKNNGTLILNKDNKYYDYLLSHVDRDV-VSFGRSESATVCLLNVIKNDKGLNLKIRLN-NNQIMNCNLCVQGKHFVYSVLAVVAVIQNLGLNLSKLPLALENFNITKGRGSVHKA-KYNGKCIHLIDDSYNASPASMKAAIRTLGIYSN-RRKVALLGDMLELGNKSITFHMKLLDSIVKYDVDKVYTVGKF-----------MLKLHRLLPGN--IKGTHFNDSNQLKSNLANIVQNNDVVLVKGSRGV-KMD-FIVQGFIIEY |
| 1P3D Chain:A ((76-473)) | ----------------------------------------------------------EGASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQMLAEIMR-----FRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGG----LVKSAGKNAHLGASRYLIAEADESDA-----SFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLP-FYGLAVMCADDPVLMELVPKV-GRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNE-RINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDD-YGHHPTEVGVTIKAAREGWGDKRIVMIFQPHR--YSRTRDLFDDFVQVLSQ--VDALIMLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAGSVSKISRGLAESW---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221427 for 3188 contacts (-69.5/contact) +
2D Compatibility (PS) -39323 + (NN) -10327 + (LL) 4080
1D Compatibility (HY) -12400 + (ID) 4000
Total energy: -283397.0 ( -88.89 by residue)
QMean score : 0.440
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