Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKYYDSNNIFAQILRGELPCKKVYEDEDVLAFYDKYPDAPVHILVVPKSQYISYDDFIFKASAEEIVGFFKTV-REITYKYNLEKTGYRLVTNCGENGEQVVPHFHMHILGGKRLGKHVNL
4EQG Chain:B ((17-123))
-------GDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPK-KHISQIS-VAEDDDESLLGHLMIVGKKCAADLGLNK-GYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG-
General information:
TITO was launched using:
RESULT:
Template:
4EQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78092 for 733 contacts (-106.5/contact) +
2D Compatibility (PS) -11586 + (NN) -8494 + (LL) 256
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -108466.0 ( -147.98 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_4EQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EQG-query.scw
PDB file :
Tito_Scwrl_4EQG.pdb
: