Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNIVIVGLQWGDEGKGKIVDYLSENADTVVRFQGGNNAGHTIVVDDEVYKLNLLPSAVLRTGKISIIGNGVALDPYALISEIESLRVKGMDINPNNLMVSESCPLILSVHKEKEKLFE---DLNGNHKIGTTNKGIGPCYEDKVGRRAIRLCDL-ENADELNKRLDTLLNYHNAIRKGLSYRVIKKEEMLREIEEIAEKIIPY-RKPVWKILNDFVKEGKKIIFEGAQGTFLDIDHGTYPFVTSSNTIASQVMTGSGLSSN--AYVIGVAKAYTTRVGNGPFPTEQRNEVGNSLFTIGKELGTVSNRKRRCGWFDAVLVRQAVQLSGVSSIILTKLDVLDSFDKIKICTGYQYSGKIYDYLPASRSIQEELEPIYEEFPGWKENTQGEKLAEKLPVNLIKYVKRVEELIGIPIHLISAGPKREDVIKLKDFKFSESVLVSY |
1LON Chain:A ((35-456)) | ----VVLGAQWGDEGKGKVVDLLATDADIVSRCQGGNNAGHTVVVDGKEYDFHLLPSGIINTKAVSFIGNGVVIHLPGLFEEAEKNEKKGLKDWEKRLIISDRAHLVFDFHQAVDGLQEVQRQAQEGKNIGTTKKGIGPTYSSKAARTGLRICDLLSDFDEFSARFKNLAHQHQSMFPTLE---IDVEGQLKRLKGFAERIRPMVRDGVYFMYEALHGPPKKVLVEGANAALLDIDFGTYPFVTSSNCTVGGVCTGLGIPPQNIGDVYGVVKAYTTRVGIGAFPTEQINEIGDLLQNRGHEWGVTTGRKRRCGWLDLMILRYAHMVNGFTALALTKLDILDVLSEIKVGISYKLNGKRIPYFPANQEILQKVEVEYETLPGWKADTTGARKWEDLPPQAQSYVRFVENHMGVAVKWVGVGKSRESMIQLF------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1LON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -146981 for 3665 contacts (-40.1/contact) +
2D Compatibility (PS) -45021 + (NN) -16325 + (LL) 1532
1D Compatibility (HY) -33600 + (ID) 9000
Total energy: -249395.0 ( -68.05 by residue)
QMean score : 0.520
|
|
|