Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFIGNRNRNKVERAISEIRRGLPIIIY--DKSNYLLVAAAETLEKDLFNQYGLISGKIYVILPSSKVTCISQNVEHSSKRLLINNFDELFHLVNCSKEDHTKELQRSKAIDECAITLLKSSELLPYALVVDVNFKDEYEMRGWCEKSDVIALDVLFINNFQQNQDIYEVCKTPLFLKQTQKVNIISYRTCNGRKEHYAIIIGNPGKNSEPLVRVHSSCYTGDLLDSLSCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIGLTNKLRAYDMQRKYNLDTVDANRILGFEDDERSFAVAAEMLKKLGIKKIQLLTNNGRKLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF--- |
2TYS Chain:A ((1-268)) | ---MERYENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGAD-------ALELGVPFSDPLADGPTIQNANLRAFAAGVT-------------------PAQCFEMLALIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEES-----------------------------APFRQAALRHNIAPIFICPPNAD------------------DDLLRQVASYGRGYTYLL---SPLHHLIEKLKEYH----------AAPALQGF-----------------GISS----PEQVSAAVRAGAAGAISGSAIVKIIEKNLASPKQMLAELRSFVSAMKAASRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2TYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63066 for 2124 contacts (-29.7/contact) +
2D Compatibility (PS) -27259 + (NN) -9441 + (LL) 8724
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -97292.0 ( -45.81 by residue)
QMean score : 0.412
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