Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHTVCEEAACPNIGECWNKRHATVMILGSVCTRACAFCNVATGI-PNKLDPHEPENLAKAIKK----------LNLKYVVITS-VDRDDLPDGGASQFIKCIEEIRKITP----ETTVEILTPDFLNKKGAFEAIAVASPDVYNHNIEMV-PRLYARIRP---RARYFHSLYLLKMVKQIN--PKL--LTKSGLMVGLGETKEEVLQVMDDLRSAEVDFITIGQYLQ-PTPKHAKIDRYVTPEEFEHYKYIAYSKGFLVVASSPLTRSSYHAEEDFNRLKACR |
| 3RFA Chain:A ((114-339)) | ------------------------------------------------RATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGE-PLLN---LNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLG---DMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCK-INLIPWNPFPGAP----YGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41205 for 1521 contacts (-27.1/contact) +
2D Compatibility (PS) -21315 + (NN) -7203 + (LL) 4608
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -70415.0 ( -46.30 by residue)
QMean score : 0.355
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