Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNQTVRGTKDLLFDEWYRFKYIQQIANRISSLYGFLPAQTPIFEYTEVFMKTLGDGSDIINKEMYTFYDKGGKSITLRPEFTAAIVRLLVEKKL--QIPIKLFSTGPAFRYERPQKGRQRQFHQINFEVFGVENPKADIELISLAHHLLTEFNISKNVRLEINSLGDSETIAKYKEVLIPYFKKFQNDLSEDSQNRLTKNPLRILDSKDEKDKLIISDAPKISDYYTRESSDFFEQILNGLTALNIPCTVNSKLVRGLDYYCHTVFEFVIEDFGAQGAVFAGGRYDNLVSSVGGKYTPAIGFAGGIERIMEL---INYSMKGDRPIC---LVPIGREAEEHALTLANELRRN--GLYVIYEYNGA-LKNRMKKASQANAKAALIFGNEELGSKTLKIKNMDTGEEKIIAYGNIMENIHQTLLV
1KMM Chain:B ((6-423))---QAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIG-----------------------------------------------------------LDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKAD-PVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHL-RTLLG


General information:
TITO was launched using:
RESULT:

Template: 1KMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -199853 for 2652 contacts (-75.4/contact) +
2D Compatibility (PS) -38064 + (NN) -13361 + (LL) 3724
1D Compatibility (HY) -27200 + (ID) 7200
Total energy: -281954.0 ( -106.32 by residue)
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_1KMM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KMM-query.scw
PDB file : Tito_Scwrl_1KMM.pdb: