Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNRSTDTKRKEMIELKGPEICTDRSRENLIVCLHGRGSSGNNFVHLAKVMSKSLPNSCFVAPNAPSKRE---IG-NGYQWFSLEDRSE--EVLYNGVKNAASIVNHFIDTKLKEFSLKDTQLSLVGFSQGAMLAIHTALTR-PQCCASVVAYSGKFLSPSRV--APKIKSRPNVCVIHGDADNVVPFSFFDLTVKALKENGVNVEGYPIRTLGHLINKEGIKLGVEFIKKNFKK
1AUO Chain:A ((11-217))
------------------------KPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQ-KRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARLG-
General information:
TITO was launched using:
RESULT:
Template:
1AUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136152 for 1624 contacts (-83.8/contact) +
2D Compatibility (PS) -21274 + (NN) -12231 + (LL) 1812
1D Compatibility (HY) -11600 + (ID) 2300
Total energy: -181745.0 ( -111.91 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_1AUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AUO-query.scw
PDB file :
Tito_Scwrl_1AUO.pdb
: