Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MD--ENINFETDTTFALIKEAQRRKYKVFAYAPSNLALKLNQPIALAQKVSVDDCN---FTSKEDVVINLNEMDIIFIRQDPPFDMRYITTTYILEKTR---ALVINNPTEMRNCPEKLITSLFPELIPPTLITENISMIRDFYHDYRGIILKPLYSYGGNDVIRIQNENSIQVVVELMITKYKCPVIAQAFCKNVNKDKRILLLDGQPIGVMKRVPRVSGEIRTNLRLGASFEPVEMNDRDNEICNKIGPELKKRGLIFVGIDIVDDFLLEINITSPTGVVYINKLYNTSLEKDLWNTFEEKASSHISQPSL |
| 1GSA Chain:? ((1-122)) | MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILKPLDGMGGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEPVPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIGDRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50343 for 686 contacts (-73.4/contact) +
2D Compatibility (PS) -11519 + (NN) -1458 + (LL) 460
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -74410.0 ( -108.47 by residue)
QMean score : 0.451
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