Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVENE-GVLLVLSSPSGAGKTTILERLLER-STNLVRSVSMTTRKPRPGEINGKDYFFVTKKEFHELCEAGQMLEYARVFENFYGIPKSFIEQNLSSGISVLLSIDWQGAFHLFELMREKVISVFILPPSMEELRLRLQKRNSDSASEIEHRLAEAQKEMSKRDKYDYVVINDDIDKSVEEISSILDKERLKRSGV
2J41 Chain:D ((5-194))
------KGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALF-IFLAPPS------------------------EARKEVEMMNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERV
General information:
TITO was launched using:
RESULT:
Template:
2J41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97252 for 1197 contacts (-81.2/contact) +
2D Compatibility (PS) -18127 + (NN) -9547 + (LL) 2852
1D Compatibility (HY) -16800 + (ID) 3400
Total energy: -142274.0 ( -118.86 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_2J41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J41-query.scw
PDB file :
Tito_Scwrl_2J41.pdb
: