Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MDYILASLSLPFFITENYLLITALVPL------LSAVVILFT-GKWPTVSNGITVASSVLLFVYTCLCTLYWAYGDHSQFILINFGNNLHVSLKLESTGVVFSLLISFLWILTSIYTIYYMQNNYPDSNYSDFLCFLLVSISCTMFIAFSGDLLTTFVFYELLTISTYPLVTYN-ATNESTIAGRYYFGVLFFSSLVLFFPVLGLLYNEFHTLDFVSSGIFEFDTSLVTFTAVCFTMLIYGLGKAALMPMHFWLPRAMVAPTPVSALLHAVAVVKSGAFIIVKVILYTFGIDNLQRFAQQNWFAGGWLPYAAGFT------IIAASLIALKQKELKRLLAYSTVSQLSYIILFASIFSDLSARVAIFQLVCHAFAKITLFFIAGSIITKTGEKYIDRIHGIGRSMPVTMVAFAIGALSMIGVPPASTFWGKFLIFQAVFNSGNIALSVFVTLVLTVGTVLNAMYFLPIIYNAFFSKSSKNFFIKKIPVFLILPPVITAICTFIIFLVTPFILPLC |
| 4D10 Chain:C ((3-403)) | SALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVPDFETLFSQVQLFISTC-------NGEHIRYATDTFAGLCHQLTNALVER---KQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPY-------------LDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVS-----------------HIMLESYKKYILVSLIL-LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKH---------SETFTRDNNMGLVKQCLSSLYKKNIQRLT--KTFLTLSLQDMASRV--QLSGPQEAEKYVLHMIED-------GEIFASINQKD--------------------GMVSFHDNPEKY----------------------------------NNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQF------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -313668 for 2617 contacts (-119.9/contact) +
2D Compatibility (PS) -37706 + (NN) -12017 + (LL) 12776
1D Compatibility (HY) -12800 + (ID) 3700
Total energy: -367115.0 ( -140.28 by residue)
QMean score : 0.218
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