Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVCGPTVYDTAHIGNARSIVVYDVLFQLLKFCYGKATYVRNITDIDDKIINAANEKDSSIESISTYYTRAFHEDMRSINCVEPTHEPKAAENIKYIIELIEYLLQSGHAYESN----KHIYFSIESYPEYGALSGKKIDELE------HGSRVEVGENKKHPGDFVLWKPANDTDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQNKSAFAG-SMFAKYWVHNGSLTVNKEKMSKSLFNIVKVRDLLDSGIKGEVIRYALFKTHYRKPLDWTESVISESQETLNKFYRLLRGIDVASIEKSDVEVSRDFIETLKNDLNIPEALAILHEMATKINKTNNENEKLKLTESFIKSARFIGLLESSYQEWFTAGISYQEIKRLIDLRKVAKQNKDYDAADKIRDQLKQMGVTISDNEDGTTTW |
| 3C8Z Chain:A ((42-413)) | MYVCGITPYDATHLGHAATYLTFDLVHRLWLDAGHTVQYVQNVTDVDDPLFERAERDGIDWRTLGDRETQLFREDMAALRVLPPHDYVAATDAIAEVVEMVEKLLASGAAYIVEDAEYPDVYFRADATAQFGYESGYDRDTMLTLFAERGGDPD--RPGKSDQLDALLWRAERPG----EPSWPSPFGRGRPGWHVECSAIALTRIGTGLDIQGGGSDLIFPHHEYSAAHAESV-TGERRFARHYVHTGMIG-------------VLVSQLRAQGVDPSAIRLGLFSGHYREDRFWSNEVLDEANARLARWRSATALPEA----PDATDVIARVRQYLADDLDTPKALAALDGWCTDALSYGGHDT-ESPRLVATTVDALLGVDL----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C8Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144416 for 2930 contacts (-49.3/contact) +
2D Compatibility (PS) -37161 + (NN) -14704 + (LL) 6084
1D Compatibility (HY) -16800 + (ID) 5450
Total energy: -212447.0 ( -72.51 by residue)
QMean score : 0.566
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