Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METDIVVIGAGPVGIFTAFQAGMLDMRCHIIDVLDQAGGQCTALYPEKPIYDIPGYPVITAQKLIEQLMEQASPFEPVYHLSQRVEEIANNDSQSFIVVTSAGTKVKCKAIIIAAGNGIFEPNRPPLSGILEYENKSVFYNV-NKISDFQDKIIVIAGGGDSAADWTVELSKVAKKIYVIHRRKEFRCVSETRNKLKLLESSGRIELVVPYQLHKLTGNDGQLSAVIIKNITSKEEKKISADFLLPFFGLSMDLGPIGSWDIQLER-SRVVVDQATLRTSRDRIYAIGDVAAYLGKLKLILNGFAESTMACYDIYKVIHNSPVNFQYSTSKVVRGKKSDLL |
3F8D Chain:A ((15-316)) | -KFDVIIVGLGPAAYGAALYSARYMLKTLVIGETP--GGQLTEAG---IVDDYLGLIEIQASDMIKVFNKHIEKYEVPV-LLDIVEKIENR---EFVVKTKRKGEFKADSVILGIGV---KRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPI---YVETVKKKPNVEFVLNSVVKEIKGDK-VVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEW-MRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -288975 for 2644 contacts (-109.3/contact) +
2D Compatibility (PS) -31458 + (NN) -5023 + (LL) 1400
1D Compatibility (HY) -15600 + (ID) 3350
Total energy: -343006.0 ( -129.73 by residue)
QMean score : 0.483
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