Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYNEKILDHYENPRNVGSLDKNDPSVGTGLVGAPSCGDVMKLQIKVNDKGVIEDAKFKTFGCGSAIASSSLLTEMIKGKTIEDVTKIKNTQ---I-------------VE---ELSLPPVKVHCSVLAEDAIKAAIHDYQSKHSKNES
1SU0 Chain:B ((8-141))
HLYMAVVADHSKRPHHHGQLDGVE---A-VQLNNPTCGDVISLTVKFD-EDKIEDIAFAGNGCTISTASSSMMTDAVIGKSKEEALALADIFSEMVQGQENPAQKELGEAELLAGVAKFPQRIKCSTLAWNALKEAIKR----------
General information:
TITO was launched using:
RESULT:
Template:
1SU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27982 for 888 contacts (-31.5/contact) +
2D Compatibility (PS) -12062 + (NN) -2460 + (LL) 324
1D Compatibility (HY) -3600 + (ID) 1900
Total energy: -47680.0 ( -53.69 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_1SU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SU0-query.scw
PDB file :
Tito_Scwrl_1SU0.pdb
: