Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPIQISEPNSNEVVFGIDLGTTNSLIAVVNKAGNVEIFTDEQGRELLPSVISYENNTLKTGYDV--------DQNAIYPIKRLMGKSVEDLN-KEGINL----EIDNESEKIIRVKCS--EDKYLTPIEISAEILKALCERVKKSTGMEVRKAVITVPAYFDDSARNATKYAAKLAGIEVLRLINEPTAAALSYSIAKNNNSGIYAVYDLGGGTFDISILKLHQGVFQVLAVGGDTKLGGDDFDHLLSMIILDKYRKKVGKDLNSLKHLSTKSRSIKEHLSKNISSTFEFNI------NGELFKCKITKEEFEQTISSLVNKTINIVTHTISNIDLKIEDIEGVILVGGATRVPLVQSSLVKLF-GNKVLNDVDPDKAVAIGAALQAHYLTSNSKDRNVLLDVLPLSLGIETMGGIVEKIIPRNTPLPVSETREFTTYIDGQTAIKIHVCQGEREIIEDNKSLAQFELKGIPQLPAGSARVEIEFIVNVDGILTVTAREKTTGIEQTVEINSSFGLSEADIQDMVNQSINNFDEDMKARSLAEAKINGNKLIHLVESNDNLSTDKNLKNLLQNTKNALQGNDLNEINNAITELESFSLELCESTNK |
| 3LDO Chain:B ((7-383)) | --------------VVGIDLGTTYSCVGVF-KNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185789 for 3000 contacts (-61.9/contact) +
2D Compatibility (PS) -37439 + (NN) -7342 + (LL) 14244
1D Compatibility (HY) -24000 + (ID) 6950
Total energy: -247276.0 ( -82.43 by residue)
QMean score : 0.543
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