Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKEERTMTNYTVDTLNLGKFITESGEVIDNLRLRYEHVGYHGQPLVVVCHALTGNHLTYGTDDYPGWWREIIDGGYIPIHDYQFLTFDVIGSPFGSSSPLNDPHFPKKLTLRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNQQFEVDKAIILAATSRTSSYSRAFNEIARQAIHLGGKEGLSIARQLGFLTYRS-SKSYDERFTPDEVVAYQQHQGNKFKEHFDLNCYLTLLDVLDSHNIDRGRTDVTHIFKNLETKVLTMGFIDDLLYPDDQVRALGERFKY-HRHFFVPDNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK |
3W04 Chain:A ((7-265)) | --------------------------------ILNVRVVGS-GERVVVLSHGFGTDQS---------AWSRVLP--YLT-RDHRVVLYDLVCAGS-VNPDH--FDFRRYDNLDAYVDDLLAILDALRIPRC-AFVGHSVSAMIGILASIRRPDLFAKLVLIGASPRFLNDSD-YHGGFELEEI---QQVF---DAMGA-NYSAWATGYAPLAVGADVPAAVQEF-SRTLFNMRPDISLHVCQTVF-------KTDLRGVLGMVRAPCVVVQTTRDVSVPASVAAYLKAHLGGRTTVEFLQ-TEGHLPHLSAPSLLAQVLRRALAR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175758 for 2213 contacts (-79.4/contact) +
2D Compatibility (PS) -27298 + (NN) -8890 + (LL) 2064
1D Compatibility (HY) -11600 + (ID) 2150
Total energy: -223632.0 ( -101.05 by residue)
QMean score : 0.396
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