Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSLKTVIGMNNKEHIKSVILALLVLM---SVVLTYMVWNFSPDIANVDNTDSKKSETKPLTTPMTAKMDTTITPFQIIHSKNDHPEGTIATVSNVNKLTKPLKNKEVKSVEHVRRDHNLMIPDLSSDFTLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDADDNIVLYAISKDRHDYVKLTTTTKNDHFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAPSKPEKLKTYRMVFNTISVEKMNAILFDDSTIVRSSKSGVTTYNNNTGVANYNDKNEKYHYKNLSEDEASSSKMEETIPGTFDFINGHGGFLNEDFRLFSTNNQSGELTYQRFLNGYPTFNKEGSNQIQVTWGEKGVFDYRRSLLRTDVVLNSEDNKTLPKLESVRSSLANNSDINFEKVTNIAIGYEMQDNSDHNHIEVQINSE---LVPRWYVEYDGEWYVYNDGRLE------- |
2DER Chain:A ((17-380)) | --AKKVIVGMSGG--VDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKL---------------------------------------GIELHTVNFAAEYWDNVFELFLAEYKA-------------GRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGH----YVRRADV------------------------------DGKSRLLRGLDSNKDQSYFL--YTLSHEQIAQSLFP---VGELEKPQVRKIAEDLGLVKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLG-------IGGTKEGTEEPWYVVDKDV----ENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTD-----IPCTVK-------ALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24712 for 2682 contacts (-9.2/contact) +
2D Compatibility (PS) -35055 + (NN) -132 + (LL) 7072
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -62327.0 ( -23.24 by residue)
QMean score : 0.192
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