Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQSIPALPVGDIKKSIGFYCDKLGFTLVHHEDGFAVLMCNEVRIHLWEASDEGWRSRSNDSPVCTGAESFIAGTASCRIEVEGIDELYQHIKPLGILHPN------TSLKDQWWDERDFAVIDPDNNLISFFQQIKS
1ECS Chain:A ((2-120))
TDQATPNLPSRDFDSTAAFYER-LGFGIVFRDAGWMILQRGDLMLEFFAHPGL--------------D--PLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE--
General information:
TITO was launched using:
RESULT:
Template:
1ECS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66382 for 750 contacts (-88.5/contact) +
2D Compatibility (PS) -11908 + (NN) 847 + (LL) 108
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -85985.0 ( -114.65 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1ECS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ECS-query.scw
PDB file :
Tito_Scwrl_1ECS.pdb
: