Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNDNEKRVLREIYNHHNISRTQISKNLEINKATISSILNKLKYKSLVNEVGEGDSTKSGGRKPILLKVNHLYGYFISLDLTYSSVEVMYNYFDGNVIKHESYDLPDE-KVSSILSIIKK-HIDIQ-EKLDTYNGLLGVSVSIHGVVDNEQH-VTYLPFHETEG-ISIAKKIKEITNVPVVVENEANLSALYERNFNHNLSYNNLIALSIHKGIGAGLIINNQLYRGANGEAGEIGKTLVSKVSDNV-E-IFHKIEDIFSQEALLHNLSNQLN---------------EKMTLSKLIQFYNEKNPVVVEEMEQFINKIAVLIHNLNTQFNPNAIYINCPLFNEMPEILEAIKNQFKQYSR----NEIQIKLTSNVKFATLLGGTLAIIQKVLQINDIYLDIKA |
2QM1 Chain:A ((2-323)) | --------------------------------------------------------------------NAMDKKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCLETVSSATGVVRVARHLSEEFAGDSELKQAIDDGQDVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQFS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203641 for 2572 contacts (-79.2/contact) +
2D Compatibility (PS) -31558 + (NN) -10372 + (LL) 5160
1D Compatibility (HY) -7600 + (ID) 2650
Total energy: -250661.0 ( -97.46 by residue)
QMean score : 0.421
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