Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDNEKRVLREIYNHHNISRTQISKNLEINKATISSILNKLKYKSLVNEVGEGDSTKSGGRKPILLKVNHLYGYFISLDLTYSSVEVMYNYFDGNVIKHESYDLPDE-KVSSILSIIKK-HIDIQ-EKLDTYNGLLGVSVSIHGVVDNEQH-VTYLPFHETEG-ISIAKKIKEITNVPVVVENEANLSALYERNFNHNLSYNNLIALSIHKGIGAGLIINNQLYRGANGEAGEIGKTLVSKVSDNV-E-IFHKIEDIFSQEALLHNLSNQLN---------------EKMTLSKLIQFYNEKNPVVVEEMEQFINKIAVLIHNLNTQFNPNAIYINCPLFNEMPEILEAIKNQFKQYSR----NEIQIKLTSNVKFATLLGGTLAIIQKVLQINDIYLDIKA
2QM1 Chain:A ((2-323))--------------------------------------------------------------------NAMDKKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCLETVSSATGVVRVARHLSEEFAGDSELKQAIDDGQDVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQFS------------


General information:
TITO was launched using:
RESULT:

Template: 2QM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -203641 for 2572 contacts (-79.2/contact) +
2D Compatibility (PS) -31558 + (NN) -10372 + (LL) 5160
1D Compatibility (HY) -7600 + (ID) 2650
Total energy: -250661.0 ( -97.46 by residue)
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_2QM1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QM1-query.scw
PDB file : Tito_Scwrl_2QM1.pdb: