Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNKDIYSDDFQNALVDIILNIDKINVKEVFDDSCRAVDQDNKKDTLNRSPKDFSINISDIVRYSILCMENLSSDKIEENINMIKNHSSELNDNDMFIQEKNN-FTTNFNKFCNALGINIANFKS-GKSYVFK-P-KSLFVL-YDILSNNSVYLHFFK-NGINDKDIDSSNRIKENLYYFINHEI-TDQRDYEHALTNYYLYFLVDS-NIEIGIKSIIIKIFTEKGITSKDKLQILEYYLDEIDDLNTEISTKIADAHVKNSTNFLENEKVSINSNLAKYITHRDTRASAPKNMLLSLILNSDLVSPKDLEEKELKYPKKITKEHHDKLIKEINKALDYYNDNNTTPSDYFYITSD |
| 4JGL Chain:A ((18-169)) | -----------------------------------------------------------------------------------------------GNAPSGYLMPAISANNFCG-------DFTTMTPDYGYLMPEKGLFLKMHDIRGAYGINIYTYVMDG-------------DNIQCTPGHFVMIVPRGGD----KLEITIKKSSMKNTPSFTFIPTPDCENSAYVATEKVAGKYYYLCGDAEARYKFEDLFEDERCAEFKNLVDNYGK------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27173 for 988 contacts (-27.5/contact) +
2D Compatibility (PS) -14983 + (NN) 2857 + (LL) 11172
1D Compatibility (HY) -800 + (ID) 1200
Total energy: -30127.0 ( -30.49 by residue)
QMean score : 0.236
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