Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKD-VHDLFLNHVNSNAVK-------TRKMMGEYIIYY-----DSVVIGGLY-----DNRLLVKATKSVRHQLQDNT--LVSPYPGAKEMILIPDIT----EAINLTNLFELIKNDLKN-------------------
1K3E Chain:A ((1-146))
MSSRSELLLEKFAEKIGIGSISFNENRLCSFAIDEIYYISLSDANDEYMMIYGVCGKFPTDNSNFALEILNANLWFAENGGPYLCYEAGAQSLLLALRFPLDDATPEKLENEIEVVVKSMENLYLVLHNQGITLKIEEISS
General information:
TITO was launched using:
RESULT:
Template:
1K3E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33447 for 504 contacts (-66.4/contact) +
2D Compatibility (PS) -10758 + (NN) -5725 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 800
Total energy: -57530.0 ( -114.15 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_1K3E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K3E-query.scw
PDB file :
Tito_Scwrl_1K3E.pdb
: