Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------MKRLN-KLVLGIIFLFLVISITAGCGIGK-EAEVKKSFEKTLSMYPIKNLEDL-YDKEGYRDDQFDKNDKGTWIINSEMVIQPNNEDM--VAKGMVLYMNRNTKTTNGYYYVDVTKDEDEGKPHDNEKRYPVKMV-DNKIIPTKEIKDK-NIKK-EIENFKFFVQYGNFKDLSKYKDGDISYNPEVPSYSAKYQVTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKGSSVGYKDI----------EFTFVEKKGENIYFSDSLHLEPSEDK------- |
| 1T9K Chain:A ((5-344)) | LKTKTMEWSGNSLKLLDQRKLPFIEEYVECKTHEEVAHAIKEMIVRGAPAIGVAAAFGYVLGLRDYKTGSLTDWMKQVKETLARTRPTAVNLFWALNRMEKVFFENADRENLFEILENEALKMAYEDIEVNKAIGKNGAQLIKDGSTILTHCNAGALATVDYGTALGVIRAAVESGKRIRVFAD----ETRPYLQGARLTAWELMKDGI-EVYVITDNMAGWLMKRGLIDAVVVGAD----RIALNGDTANKIGTYSLAVLAKRNNIPFYVAAPVSTIDPTIRSGEEIPIEERRPEEVTHCGGNRIAPEGVKVLNPAFDVTENTLITAIITEKGVIRPPFEENIKKILE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 72518 for 1995 contacts (36.3/contact) +
2D Compatibility (PS) -25748 + (NN) -4438 + (LL) 516
1D Compatibility (HY) 3600 + (ID) 1550
Total energy: 44898.0 ( 22.51 by residue)
QMean score : 0.092
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