Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MKRLNKLVLYISFLILV-----ISFTAGCGMGKEAEIKKSFEKT-----LSMYPIKNLEDLYDK-EGYRDDQFDKNDKGTWIINSEMVVQPKGERMKSKGMVLYMNRNTKTTTGKYIVSETLHDEDGRPKSKDKEYPVKMVDN-------------------------KIIPTKGIKDENIKKEIE---------------------NFKFFAQYGSFKDLSKYK-DGDISYNPEV-PSYSAKYQLTNDDYNVKQLRKRYKIPTNKAPKLLLKG-----SGDLKGSSVGYKDIEFTFVEKKGENTFFTDSLHLEPSEDK------------------ |
| 3AU7 Chain:A ((20-402)) | HMRVWVGIDTYLAVLAMERVERELGKVIGFPRLIRLNPTINGAVSFLVEVDDVGELVDVVNEVIIEPGAVFVDEELAVKLKPFADKAIKDVLQIDEALFVIGKYFIPHLRHKKGRGLIGALAAVGAELEDFTLELIAY-RYPERFGTEREYDEESFFDMDYELYPQTFDNVDWCNDVVVCIPNTPCPVLYGIRGESVEALYKAMESVKTEPVDRRMIFVTNHATDMHLIGEEEVHRLENYRSYRLRGRVTLEPYDIEGGHVFFEIDTKFGSVKCAAFEPTKQFRNVIRLLRKGDVVEVYGSMKKDTINLEKIQIVELAEGSERELQPGFYEVPPSARRHLSKPLIRMNVEGRHIFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AU7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32204 for 1643 contacts (19.6/contact) +
2D Compatibility (PS) -26392 + (NN) 571 + (LL) 104
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -2413.0 ( -1.47 by residue)
QMean score : 0.198
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