Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQ-----KPKFE-YIKNDLKDTKIVG--QEPAPNLEEISKLKPDLIVASKVRN---EKVYDQLSKIAPTVSTDTVFK-FKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYA-GGYAGEILNDLGFKRNKDLQKQ--VD--NGKDIIQLTSKESIPL-MNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQSK |
3TLK Chain:A ((27-320)) | ---------------------------------ADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWS-KVAKERKLQRLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLGEITGHEKQAAERIAQFDKQLAAAKEQIKLPP-QP--VTAIVYTAAAHSANLWTPESAQGQMLEQLGFTLAKLPAGLNASQSQGKRHDIIQLGGENLAAGLNGESLFLFAGDQK---------DADAIYANPLLAHLPAVQNKQVY-ALGTETFR-LDYY-SAMQVLDRLKALFLE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12042 for 2271 contacts (-5.3/contact) +
2D Compatibility (PS) -29231 + (NN) -7283 + (LL) 3724
1D Compatibility (HY) -10000 + (ID) 3000
Total energy: -57832.0 ( -25.47 by residue)
QMean score : 0.424
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