Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIVQPVIEQLKAQSHPVCHYIYDLVGLEHHLQHITSSLPSNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKGL-AFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRVNLA-GPFPNATLHMAGRPTQFGISEDEV--DDVIEAALVMPNIHLDGFHFHSISNNLDSNLHVDVVKLYFKKAKSWSEKHRF----PLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQ-----EMEDVTLNFECGRFIVAHIGYYVTEVLDIKKVH-----GAWYAILRGGTQQFRLPVSWQHNHPFEIYRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDA-ISTGDVIVFKYAGAYGWSISHHDFLSHPHPEFIYLTQTKEDE |
2O0T Chain:A ((34-429)) | ---------TQLAQEYGTPLFVIDEDDFRSRCRETAAAFGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLP-TPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV--------SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSR-YNMVGRPAVVAVHAG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217977 for 3221 contacts (-67.7/contact) +
2D Compatibility (PS) -39924 + (NN) -7033 + (LL) 1476
1D Compatibility (HY) -11200 + (ID) 4100
Total energy: -278758.0 ( -86.54 by residue)
QMean score : 0.462
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