Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQAQYTELEKTLPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRD--MNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQDHMNQNTHMNQQPQIQQGHMQSSNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRSTNK |
3UX4 Chain:A ((1-195)) | MLGLVLLYVGIVLISNGICGLT------KVDPKSTAVMNFFVGGLSIVCNVVVITYSALHPTAPSFYGPATGLLFGFTYLYAAINHTFGLDWRPYSWYSLFVAINTVPAAILSHYSDMLDDHKVLGITEGDWWAIIWLAWGVLWLTAFIENILKIPLGKF--------------------------------------------------TPWLAIIEGILTAWIPAWLLFIQHWV--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27524 for 1278 contacts (21.5/contact) +
2D Compatibility (PS) -17325 + (NN) 5900 + (LL) 3372
1D Compatibility (HY) -8400 + (ID) 1150
Total energy: 9921.0 ( 7.76 by residue)
QMean score : -0.009
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