Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLEIPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGFNFGDLM-IGIPQIGDLFKQMIPPDFEYLQQITTPMLDTIRMAIVSTVL---------GSIVSIPIALLCASNIVHQKWISIPSRFI---LNIVRTIPDLLLA--------AIFVAVFGIGQ----IPGILA---------------------------------------LFILTICI-IGKLLYESLETIDPGPM----EAMTAVGANKI---KWIVFGVVPQAISSFM--SYVLYAFEVNIRASAVLGLVGAGGIGLFYDQTLGLFQYPKTATIILFTLVI---VVVIDYISTKVRAHLA |
| 4V12 Chain:A ((7-343)) | DTSTLESRVGHYYQMEDTYLVGREKVREFARAVQDYHPAHWNLATAADLGHPGLIAPLTFTSAPAMACNQRMFESVVVGYDMYLQTEEVFEQHRPIVEGDELSIDIELTSVRRIAGRDLITVTNTFTDTAGEVVHTLHTTVVGITAEDVDPAIRPAVQGVMMHGINMLGVEETNAPYEKTVRPEGELRIAQGGATRTPTSLNFDDLKVGEELPVHTARLSRGDLVNYAGVAGDANPLHWDENIAKLAGQPDVIAHGMLTMGLGAGFVSSWSGDPGAITRYAVRLSQPAV---VPAEGTEIEYSGRIKSLD-PETRTGVVIVAAKSGGRKIFGLATATIRFS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243263 for 1954 contacts (-124.5/contact) +
2D Compatibility (PS) -27413 + (NN) -86 + (LL) 592
1D Compatibility (HY) -5200 + (ID) 2150
Total energy: -277520.0 ( -142.03 by residue)
QMean score : 0.044
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