Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLNHIESLEEVQALNLKFYYGQEIRITDQILN-DIDRKVITGINDSRYLLI----EFPSNEVPHYTDQLFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTASLAGISGKKIRKLAIQMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKRMPQQDYKQKRWFGL- |
1M65 Chain:A ((2-245)) | YPVDLHMHT----VASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWPRVVD-----GVGILRGIEANIKNVDGEIDCSGKMFDSLD---LIIAGFHEPVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEIN-------NSSNCREVAAAVRDAGGWVALGSDSHT-------AFTMGEFEECLKILDA-VDFPPERILNVSPRRLLNFLESRGMAPIAEFADL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75894 for 1940 contacts (-39.1/contact) +
2D Compatibility (PS) -24301 + (NN) -8618 + (LL) 2248
1D Compatibility (HY) -3600 + (ID) 1600
Total energy: -111765.0 ( -57.61 by residue)
QMean score : 0.303
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