Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQISIEEPGLQEVYEEVLSSGKLKVST----TPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLEKGNTIIVESTIAPKTMDDFVKPVIENL--GFTIGEDICLVHCPERVLPGKILEELVHNNRIIGGVTK-ACIEAGKYVYRTFVQGE--MI-ETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRV--NIHQPGPGVGGHCLAVDPYFIIAKDPE---NAKLIQTGREINNSMPAYVVDTTKQIIKAL-SGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD-F--------VEHDMSHAVKDASLVLILSDHSEFKNLSDSHFDK-MKHKVIFDTKNVVKSSFEDVSYYNYGNIFNFIDK |
| 3GG2 Chain:A ((3-436)) | LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADIIFIAVGTPAGE--DGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKA-IQEELDKREVLIDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPML-LNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVANLCERVGADVSMVRLGIGSDSRIGSKFLYPGCGYGGSCFPKDVKALIRTAEDNGYRMEVLEAVERVNEKQKSILFDKFSTYYKGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEV-GCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHVTEWKEFRMPDWSALSQAMAASLVIDGRNVYELP---FTLLNIG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221577 for 3407 contacts (-65.0/contact) +
2D Compatibility (PS) -42960 + (NN) -6085 + (LL) 876
1D Compatibility (HY) -27200 + (ID) 5250
Total energy: -302196.0 ( -88.70 by residue)
QMean score : 0.545
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