Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MIFSQNLFRCPTPTCIVCRNWESNFSLLGPTPQLALPVEFLFEILCVGAPD
3CS5 Chain:A ((12-59))
VEQQFDLQKYRQQVRD----ISREDLEDLFIEVVRQKMAHENIFKGMIRQGS-
General information:
TITO was launched using:
RESULT:
Template:
3CS5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1849 for 192 contacts (-9.6/contact) +
2D Compatibility (PS) -4770 + (NN) -1704 + (LL) 432
1D Compatibility (HY) 800 + (ID) 300
Total energy: -7391.0 ( -38.49 by residue)
QMean score : -0.190
(partial model without unconserved sides chains):
PDB file :
Tito_3CS5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CS5-query.scw
PDB file :
Tito_Scwrl_3CS5.pdb
: