Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKVGIVGGSGYGAIELIRLLQTHPHVTIAHIYS--HS-KVDEPLKLTFPHLQHIMQ-HFEALT---VDNNDCDVIFFATPAPVSKTCIPPLVEKGIHVIDLSGAFRIKNREIYEAYYKETAAAQDDLNHAIYSISEWQSFDNNGTKLISNPGCFPTATLLALHPLISEKIVDLSS-IIIDAKTGVSGAGRSLSQRVHFSEMNENLSAYAIGNHKHKPEIEQYLSIIAGQDVSVIFTPHLVPMTRGILSTIYVKFSSEYTTESLHKLMTSYYANQPFVRIRDIGTFPTTKEVLGSNYCDIGI-YVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGLNQSPVYP |
| 3DR3 Chain:A ((4-337)) | MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCE--VSLQPYGVFTHRHQPEIA----THLGA--DVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDK-GVPALKNVVGLPFCDIGFAVQ---GEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235559 for 2879 contacts (-81.8/contact) +
2D Compatibility (PS) -34698 + (NN) -6180 + (LL) 608
1D Compatibility (HY) -27200 + (ID) 6200
Total energy: -309229.0 ( -107.41 by residue)
QMean score : 0.447
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