Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYSINMNMYTRLLLLDEN--DHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKN-AYQATFQRNPGFNETEKGSYGSPKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKK-----GIFKTHPNLRQAVVNAIDQDQFIK-FYRGDKFKIASPITP--LVDTG----------NEQRQDLEKVEKAINQ |
| 1ZU0 Chain:A ((12-332)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTMVRNFNPYLATN--LRTTTDFIYEPLVVFNEMKGNTPV--FRLAESYKMADDLMSVTFDIRKGVKWS---------DGEAFTADDVVYSFGLLKAKPELDQ---RGINKWVTSVEKVD-------------------------------------------EY-KVRFRLSEANSNVPYEISL--IPIVAEHVWKDVKDP-------------TTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDA-----ANLEVDCLRVPQIANNDQLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVNFKNPDPAKKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFASGLGYAFEAWSDEATHKKYKGFNTYDVEGSKKLLAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31696 for 2094 contacts (-15.1/contact) +
2D Compatibility (PS) -31548 + (NN) -11777 + (LL) 15092
1D Compatibility (HY) -10400 + (ID) 2000
Total energy: -72329.0 ( -34.54 by residue)
QMean score : 0.387
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