Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKQIISLGALAVASSLFTWDNKADAIVTKDYSKESRVNEKSKKGATVSDYY---YWKII--DSLEAQFTGAI--DLLEDYKYGDPIYKEAKDRLMTRVLGEDQYLLKKKIDEYELYKKWYKSSNKNTNMLTFHKYNLYNLTMNEYNDIFNSLKDAVYQFNKEVKEIEHKNVDLKQFDKDGEDKATKEVYDLVSEIDTLVVTYYADKDYGEHAKELRAKLDLILGDTDNPHKITNERIKKEMIDDLNSIIDDFFMETKQ-NRPNSITKYDPTKHNFKEKSENKPNFDKLVEE----TKKAVKEADESWKNKTVKKYEETVTKSPVVKEEKKVEEPQLPKVGNQQEVKTTAGKAEETTQPVAQP-LVKIPQETIYGETVKGPEYPTMENKT--LQGEIVQGPDFLTMEQNRPSLSDNYTQPTTPNPILEGLEGSSSKLEIKPQGTESTLKGIQGESSDIEVKPQATETTEASQYGPRPQFNKTPKYVKYRDAGTGIREYNDGTFGYEARPRFNKPSETNAYNVTTNQDGTVSYGARPTQNKPSETNAYNVTTHANGQVSYGARPTQKKPSKTNAYNVTTHANGQVSYGARPTQKKPSKTNAYNVTTHANGQVSYGARPTYKKPSETNAYNVTTHANGQVSYGARPTQKKPSETNAYNVTTHADGTATYGPRVTK |
| 4KRT Chain:A ((7-353)) | -----------------------------HHHHHMQSRNNNNLKGIDVSNWKGNINFESVKNDGVEVVYIKATEGNYFKD-KYAKQNYEGAKEQGLSVGFYHFFRANKGAKDQANFFIDYLNE----IGAVNYDCKLALDIETTEGVG-VRDLTSMCIEFLEEVKRLTGKEVVVYTY----TSFANNNLDSRLGNYPVWIA-HYGVNTPGANNI-WSSWVGFQYSENGSVAGVNGG-------CDMNEFTEEIFIDSSNFNLDNATTKNVSTKLNIRAKGTTNSKIIGSIPAGETFKIKWVDEDYLGWYYVEYNGVVGYVNADYVEK----LQMATTYNVSTFLNVREEGSLNSRIVDKINSGDIFRIDW--VDSDFIGWYRITTKNGKVGFVNAEFVKKL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 93199 for 2510 contacts (37.1/contact) +
2D Compatibility (PS) -34155 + (NN) 1654 + (LL) 12780
1D Compatibility (HY) -14000 + (ID) 2600
Total energy: 56878.0 ( 22.66 by residue)
QMean score : 0.103
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