Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWSFKSMFNTPEDPEKDAYEFYGKVQPGITTPTQKTCNFVALDLKSKDRDAIKAMFKKWTVMADRMMDGDTVGKTSNNPLMPPVDTGESIGLGASKLTITFGISKSLMKKIGLSSKIPDAFKDLPHFPNDQLIDDYSDGDIMIQACSNDSQVSFHAVHNLVRPFRDIVKVRWAQSGFISAKGKETPRNLMAFKDGTINPRKSNQLKDYVFID--DGWAKHGTYCVVRRIQIHIETWDRTALEEQEATFGRKRHSGAPLTGGKEFDEIDLKAKDSHGEYIIDKDAHTRLAKEA-----NTSILRRAFNYVDGTDDRTGNFETGLLFIAFQKATKQFIDIQNNLGS------NDKLNEYITHRGSASFLVLPGVSKGGYLGETLFD |
| 2IIZ Chain:A ((8-308)) | ----------------------PREQLGVCAEGNLHSVYLMFNANDNVESQLRPCIANVAQYIYELTDQYS----------------------DSAFNGFVAIGANYWDSL-YPESRPEMLKPFPAMQEGNREAPAIEYDLFVHLRCDRYDILHLVANEISQMFEDLVELVEEERGFRFMD----SRDLTGFVDGTENPKGRH-RQEVALVGSEDPEFKGGSYIHVQKYAHNLSKWHRLPLKKQEDIIGRTKQDNIEYES-----------E------DKPLTSHIKRVNLKDENGKSIEILRQSMPYGSLK-------EQGLMFISTCRTPDHFEKMLHSMVFGDGAGNHDHLMHFTSALTGSSFFAPSLDFLM--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105698 for 2404 contacts (-44.0/contact) +
2D Compatibility (PS) -30380 + (NN) -9437 + (LL) 2060
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -156305.0 ( -65.02 by residue)
QMean score : 0.366
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