Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAFITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI
4XWA Chain:B ((2-205))
-SAFITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKN------LDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI
General information:
TITO was launched using:
RESULT:
Template:
4XWA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92762 for 1601 contacts (-57.9/contact) +
2D Compatibility (PS) -22113 + (NN) -13372 + (LL) 344
1D Compatibility (HY) -29200 + (ID) 9900
Total energy: -167003.0 ( -104.31 by residue)
QMean score : 0.691
(partial model without unconserved sides chains):
PDB file :
Tito_4XWA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XWA-query.scw
PDB file :
Tito_Scwrl_4XWA.pdb
: