Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFSDYQLILDELKMTLSHVEADEFSTFASKILH-----AEHIFVAGKGRSGFVANSFAMRLNQLGKQAHVVGES-----TTPAIKSNDVFVIISGSGSTEHLRLLADKAKS--VGADIVLITTNKDSAIGNLAGTNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVTEQTMQQNHANLE
3ETN Chain:A ((24-206))
-----IQELLQKEAQAVLNIPVTDAYEKAVELIVEQIHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLSTGHPAEV-CTLGMTPTTS--TTVMTVIGDILVVQTMKRTEFTIEEYSKRHH---
General information:
TITO was launched using:
RESULT:
Template:
3ETN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85499 for 1349 contacts (-63.4/contact) +
2D Compatibility (PS) -19205 + (NN) -14323 + (LL) 952
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -126575.0 ( -93.83 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_3ETN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ETN-query.scw
PDB file :
Tito_Scwrl_3ETN.pdb
: