Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPH--LQDWAREGVLLLNTVLTVRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVHPSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
3FCF Chain:A ((21-222))
---------------FIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKE---
General information:
TITO was launched using:
RESULT:
Template:
3FCF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99602 for 1579 contacts (-63.1/contact) +
2D Compatibility (PS) -21703 + (NN) -10674 + (LL) 1424
1D Compatibility (HY) -17600 + (ID) 4900
Total energy: -153055.0 ( -96.93 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_3FCF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FCF-query.scw
PDB file :
Tito_Scwrl_3FCF.pdb
: