Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRITEANNEIEL
3G3Z Chain:A ((3-114))
-------QLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLAT--EGSRTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAAPLTESAQEFSDKVFAT---
General information:
TITO was launched using:
RESULT:
Template:
3G3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34072 for 730 contacts (-46.7/contact) +
2D Compatibility (PS) -12176 + (NN) -8354 + (LL) 1264
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -56538.0 ( -77.45 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_3G3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G3Z-query.scw
PDB file :
Tito_Scwrl_3G3Z.pdb
: