Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRNGEV-----------SVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFIYQPVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKE-QNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYGELDDVLPKYEAFLNDFKKKSKAEQKEFRNKLDEARFVIK
2YYZ Chain:A ((2-226))--PSIRVVNLKKYFG--------------------KVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPKYREVGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPK-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108199 for 1667 contacts (-64.9/contact) +
2D Compatibility (PS) -22699 + (NN) -1601 + (LL) 3948
1D Compatibility (HY) -11200 + (ID) 2350
Total energy: -142101.0 ( -85.24 by residue)
QMean score : 0.419

(partial model without unconserved sides chains):
PDB file : Tito_2YYZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YYZ-query.scw
PDB file : Tito_Scwrl_2YYZ.pdb: