Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIISIMAVMLFLTGCGKSQEKATLEKDIDNLQKENKELKDKKEKLQQEKEKLADKQKDLEKEVKDLKPSKEDNKDDKKDEDKNKDKDKDKEASQDKQSKDQTKSSDKDNHKKPTSTDKDQKANDKHQS
3HE4 Chain:B ((1-44))
---------------------NTVKELKNYIQELEERNAELKNLKEHLKFAKAELEFELAAHKFE------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14526 for 168 contacts (86.5/contact) +
2D Compatibility (PS) -5074 + (NN) -5609 + (LL) 3212
1D Compatibility (HY) -2000 + (ID) 650
Total energy: 4405.0 ( 26.22 by residue)
QMean score : 0.882
(partial model without unconserved sides chains):
PDB file :
Tito_3HE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HE4-query.scw
PDB file :
Tito_Scwrl_3HE4.pdb
: