Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKNLFLGFVAVILTVCLIGLLILATNEDALAKVHKTINTLNAINVSTEDTYKKKMDILNIHTAKASEVNENVEKQNHFKHRVNANKSNSFNEQECQVIADRYADKHINDNYGLERISKTNHGYNYVYSNDNSTSKQHVSISNQGIITK
3T3R Chain:D ((271-327))
MTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKM---------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3T3R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11835 for 245 contacts (-48.3/contact) +
2D Compatibility (PS) -5727 + (NN) -2825 + (LL) 4796
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -18091.0 ( -73.84 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_3T3R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T3R-query.scw
PDB file :
Tito_Scwrl_3T3R.pdb
: