Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRG-ENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEEGYEWVKEEFGSAE |
1V43 Chain:A ((10-237)) | -MVEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAG--LEEPTEGRIYFGDRDVTYLPP---KDRNISMVFQ------HMTVYENIAFPL--KKFP-----KDEIDKRVRWAAELLQIEE-L-LNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAM-TMGDRIAVMNRGQLLQIGSPTEVY------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1V43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -110733 for 1728 contacts (-64.1/contact) +
2D Compatibility (PS) -22545 + (NN) -2723 + (LL) 2336
1D Compatibility (HY) -9200 + (ID) 2250
Total energy: -145115.0 ( -83.98 by residue)
QMean score : 0.490
|
|
|