Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKVSDLRLKYPNG-----QRKIFDHLNITI-QDKEKVLLLGPSGCGKSTLLNVLSGIVPNLIELPMKYDELIV-------DPLSG--------------VIFQDPDSQFC---MPKVYEELAFVLENRQVPREDMDALIINALNMVNLNVTPETYIKDLSGGMKQKLAIVETILQQSKTLFLDEPTAMLDVQATEDLWTKLIELWED-QTVVIVEHKVKHIWNHVDRVILMDYNGNIIADECPE---IILQKYVHLLS-E---YGVWH-PRAWEFAPSRVDFPTTNSHLLQFKNGRIIRGKSTLLSFSDLEIGLGEWITITGANGSGKTTLLESIMQLIKY-QGDVYFENQRLTKIKHAAKHMYLVYQNPELQFITNSVYDEINIHFNHLSKDQSDDETIQLLKLLDLQNVKDQHPYELSIGQKRRLSVATALSSKADIIFLDEPTFGLDSHNTFQLIKLFQKRIN-LGQSIVMVTHDDEIIERYPSRRLKISDGALLDCDGDTNV |
3BK7 Chain:A ((84-547)) | -ISIVNLPEQLDEDCVHRYGVNAFVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNLC---EDNDSWDNVIRAFRGNELQNYFERLKNGEIRPVVKPQYVD-LLPKAVKGKVRELL---------KKVDEVGKFEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGEP-G-VYGIFSKPKGTRNGINEFLQGYLKDENVRFRPYEIRFTKLSERVDVERETLVEYPRLVKDYGS-FKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDL-----------TVAYKPQYIK-AEYEGTVYELLSKIDSSKL--NSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEG------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -202338 for 3283 contacts (-61.6/contact) +
2D Compatibility (PS) -45182 + (NN) -13770 + (LL) 3084
1D Compatibility (HY) -16000 + (ID) 4650
Total energy: -278856.0 ( -84.94 by residue)
QMean score : 0.354
|
|
|