Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDIDRLLENFKGVIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDFKENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSLTLEQIKELHEQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKNEFDN----KIKDQIVFIDDDSEKVLAIYMVHPTKESEIKPKKVFN |
1R3E Chain:A ((1-287)) | MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVYWVKMRLGLITETFDITGEVVEEREC---NVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIE---G--RDVSFRVEVSPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLNVFEAAP----EEIENRIIPLEKCLEWLPRVVVHQES-TKMILNGSQIHLEMLKEWDGFKK-GEVVRVFNEEGRLLALAEAERN------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122760 for 2185 contacts (-56.2/contact) +
2D Compatibility (PS) -30189 + (NN) -8839 + (LL) 1760
1D Compatibility (HY) -18400 + (ID) 4750
Total energy: -183178.0 ( -83.83 by residue)
QMean score : 0.510
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