Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDE-----MLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQ--LDAPVYGSKLTIALIKENMKARNI----------D-------KKVRYYTVNNDSIMRFK-NVNISFFNTTHSIPDSLGVCIHTS--YGAIVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKV---RGRLIVSCYASNFIRIQQVLNIASKLNR------KVSFLGRSLESSFNIARK-MGYFDIP--------------KDLLIP---ITEVDN-YPKNEVIIIATGM----QGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVI-IANTLNELV-----------RAGAHIIPNNKKIHASSHGCMEELKMMINIMK--PEYFIPVQGEFKMQIAHAKLAA-EAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI |
| 3AF5 Chain:A ((186-650)) | -------SRWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFD--APEFQYV-LREGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGH-ILGSAIVHLHIGNGLHNIAITGDFKFIPTRLLEPA----N-AK--FPRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMA--VGRAQEVMMVLEEYARIGGIEVPIYLDGMIWE-ATAIHTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRERQDIIDSNEPAIIIASSGMLVGGPSVEYFKQ--------LAPDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTI---DGFSGHADRRELMNYVAKVRPRPERIITVHGEPQKCLDLATSIHRKFGI---STRAPNNLDTIRL----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244371 for 3502 contacts (-69.8/contact) +
2D Compatibility (PS) -42518 + (NN) -16637 + (LL) 12416
1D Compatibility (HY) -15200 + (ID) 4200
Total energy: -310510.0 ( -88.67 by residue)
QMean score : 0.486
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