Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK |
4K5X Chain:A ((9-141)) | ---------------------------------------------KEPATLIKAIDGDTMKLMYKGQPMTFRFLLVDTPETKHP---VEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIY-ADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2244 for 1004 contacts (2.2/contact) +
2D Compatibility (PS) -13778 + (NN) -5961 + (LL) 3420
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -25775.0 ( -25.67 by residue)
QMean score : 0.499
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