Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQ--IGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHFNKIYFLRISTLPLSLGQESCVIRIVPQFFQQQ---KSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLNVISIEDPVEMQIPG----IVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAILRLLEMGIS------VQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHS-----------LPSSFKNLEDKLDDMTKAGVICETTMDKYI |
| 3JVV Chain:A ((2-337)) | ---DITELLAFSAKQGASDLHLSAGL---PPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETD--FSFEVPGVARFRVNAFNQNR-GAGAVFRTIPSKVLTMEELGMGE---VFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR-DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKK----RVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCLKG-------SRENAREK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3JVV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -202803 for 2360 contacts (-85.9/contact) +
2D Compatibility (PS) -32837 + (NN) -11694 + (LL) 2032
1D Compatibility (HY) -10000 + (ID) 3350
Total energy: -258652.0 ( -109.60 by residue)
QMean score : 0.486
|
|
|